Version store out of memory when building SSDT project with msbuild.exe

I use Bamboo to build my SSDT database projects. It is random that sometimes build fails with message:

error MSB4018: Microsoft.Isam.Esent.Interop.EsentVersionStoreOutOfMemoryException: Version store out of memory (cleanup already attempted)

Full stack trace is like this:

C:\Program Files (x86)\MSBuild\Microsoft\VisualStudio\v11.0\SSDT\Microsoft.Data.Tools.Schema.SqlTasks.targets(550,5): 
error MSB4018: The "SqlBuildTask" task failed unexpectedly.
error MSB4018: Microsoft.Isam.Esent.Interop.EsentVersionStoreOutOfMemoryException: Version store out of memory (cleanup already attempted)
error MSB4018:    at Microsoft.Isam.Esent.Interop.Update.Save(Byte[] bookmark, Int32 bookmarkSize, Int32& actualBookmarkSize)
error MSB4018:    at Microsoft.Data.Tools.Schema.SchemaModel.ModelStore.EseResultSet.Update(Action action)
error MSB4018:    at Microsoft.Data.Tools.Schema.SchemaModel.ModelStore.RelationshipEntry.set_Element(IModelElement value)
error MSB4018:    at Microsoft.Data.Tools.Schema.SchemaModel.DataSchemaModel.ReferenceLinker.ResolveInternalElementReferences()
error MSB4018:    at Microsoft.Data.Tools.Schema.SchemaModel.DataSchemaModel.LoadExternals(TextReader input, String fileName, String logicalSourceName, IList`1 externalPartsSubstitution, Boolean suppressErrorsForMissingDependencies)
error MSB4018:    at Microsoft.Data.Tools.Schema.SchemaModel.DataSchemaModel.AddReference(CustomSchemaData customData)
error MSB4018:    at Microsoft.Data.Tools.Schema.Sql.SchemaModel.SqlSchemaModel.OnCustomDataAdded(CustomSchemaData customData)
error MSB4018:    at Microsoft.Data.Tools.Schema.SchemaModel.DataSchemaModel.AddCustomData(CustomSchemaData customData, Boolean raiseEvents)
error MSB4018:    at Microsoft.Data.Tools.Schema.Sql.SchemaModel.SqlModelBuilder.Add(CustomSchemaData customSchemaData)
error MSB4018:    at Microsoft.Data.Tools.Schema.SchemaModel.ModelBuilder.AddOrUpdate(CustomSchemaData customSchemaData)
error MSB4018:    at Microsoft.Data.Tools.Schema.Sql.Build.SqlTaskHost.AddOrUpdate(CustomSchemaData customSchemaData)
error MSB4018:    at Microsoft.Data.Tools.Schema.Tasks.Sql.TaskHostLoader.ProcessReferences(TaskLoggingHelper providedLogger, SqlTaskHost host, ErrorManager errors)
error MSB4018:    at Microsoft.Data.Tools.Schema.Tasks.Sql.TaskHostLoader.LoadImpl(ITaskHost providedHost, TaskLoggingHelper providedLogger)
error MSB4018:    at Microsoft.Data.Tools.Schema.Tasks.Sql.TaskHostLoader.Load(ITaskHost providedHost, TaskLoggingHelper providedLogger)
error MSB4018:    at Microsoft.Data.Tools.Schema.Tasks.Sql.SqlBuildTask.ExecuteLoadTaskHostStep()
error MSB4018:    at Microsoft.Data.Tools.Schema.Tasks.Sql.SqlBuildTask.ExecuteStep(Func`1 step)
error MSB4018:    at Microsoft.Data.Tools.Schema.Tasks.Sql.SqlBuildTask.Execute()
error MSB4018:    at Microsoft.Build.BackEnd.TaskExecutionHost.Microsoft.Build.BackEnd.ITaskExecutionHost.Execute()
error MSB4018:    at Microsoft.Build.BackEnd.TaskBuilder.d__20.MoveNext()

It has been already registered as a connect bug: https://connect.microsoft.com/SQLServer/feedback/details/749108/msbuild-fails-randomly-with-version-store-out-of-memory-cleanup-already-attempted-errors-msb4018
According to comments in the bug a solution is to edit project file *.sqlproj and add such section:

I just want to confirm that this fix works for me.